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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887416.1_cds_XP_016441784.1_37115
CDS Infomation

[gene=LOC107767331] [db_xref=GeneID:107767331] [protein=serine/threonine-protein kinase D6PKL1-like] [protein_id=XP_016441784.1] [location=complement(join(12019..12841,13302..14449))] [gbkey=CDS]
Sequence

ATGGAGTCACTTGTTGAAGGAGTCAGTTCTTTGCCAAACAGTCATACTTCCTTCACTCCT
ATTAAGGGTAACGCGTCTTCAGCTTCCCGGATTAGTCGTCCTCCCCATCCTACATCAATG
AGACAATCTAGATGTAAAGAGTTGTCTTTCGATCCGATAGCTATTGACTTTGGGTCGAAG
ACAATTGATACCCCAACAGGGTCGGGGACTGCTTCTAAGTGTTCATATAAAACATCCAGT
AATCGTGTAAAGAGGGATAATATCTCTGGCTCGATGAGACGCTATTCTGAATTGACTAAA
GAAAAAGAGGACATAGAAGATACTCTTGATCAACAATCACAAAAATGTTCACTTGATCGG
GTTTTAATCTTTGAAGCCAAATCAGCTTTCAAGGATTCACTTCATGATAACAAGAACACT
ACTTCAAGTGGCTTTGTGGAGCGCAAGGATTTTATGTTACATGCTGTCGGCAGAGGAGAT
GCTGACCTTTTAACATCTCAATCTGGAATAAACTATTGTCCTAGTCCTCAAAACAGCTTT
TACACTGCAACACAATACATAGAAGCCAAACAAAGTTTCACCACTACAGAAGTCATCAGC
GAATGCGCTAGCAGCATGGCCAAGTCTGGTGAAAGCGGTGATGTTAGCAACTCGTGCGAC
ATCAGTGAGAGCAGAAAAACAAGCTTCTATAGAGGCAGCACAGGTAGTGATATCAGTGAC
GAGAGCAGTTGTACTAGTTTCAGCAGCGCAATATATAAACCACATCAGGCAAATGATACA
AAGTGGGATGCAATTCAAGCCATTAGATCTCTTGATGGAACACTGGGGTTCAACCACTTC
AGACTTCTGAAGAGATTGGGAGGTGGAGACATCGGAAATGTTTTCCTAGCACAGTTGATT
GGAACAAGAGATTTCTTTGCCATGAAAGTGATGGACAAAGCAGCTCTAGAGAGTCGTAAG
AAAATTGTTAGAGCTCAGACAGAAAGAGAGATACTACAGTCTCTGGATCATCCTTTTCTA
CCAACACTCTATTCACACTTTGAAACCGACAAATTTTCCTGCTTGGTGATGGAATTCTGC
CCTGGCGGAGATTTGCATGCACTTCGGCAAAGACAACCAGGAAAGTTTTTCCCTGAGCAT
GCTGCCAGGTTCTATGTAGCAGAAGTTCTCCTTGCTCTAGAGTATCTGCACATGCTTGGA
ATCATTTATAGAGACCTTAAACCAGAGAACGTTTTGGTTCGAGAAGATGGTCATATAATG
CTATCTGACTTTGACCTCTCCTTGAGGTGTGCCACAAGTCCAACTTTGGTTAAATCCTCA
AATTCAAGTTTAGAGTCGAAGACTTCATCATACTGTGTCCAGCCTGCTTGTATTGAGCCA
TCTTGTATCATCCAGCCTGCATGTTTTTCACCGCGTTTCTTAAGCAGGCCCAAGAAAGGA
AAGAACACGAAACAGAAAACCGAGATGCACAATCAAGTGAGCCCCCTGCCAGAGCTCCTT
GCTGAACCAACAAATGCTCGATCCATGTCTTTCGTGGGGACACATGAGTACCTTGCTCCA
GAAATCATTAAAGGCGAGGGACATGGTAGTGCCGTTGATTGGTGGACATTTGGGATCTTT
CTCTATGAGCTCTTGTTCGGGCAGACACCTTTTAAAGGAGCAGGCAACAGAGCCACCTTG
TTTAATGTTGTTGGCCAGCCCCTGAGATTCCCTTCATCACCTAGTGTTAGCTTTGCTGCA
AGGGACTTGATAAGAGGTTTACTTGTGAAAGAGCCACAGCATCGCCTTGCATATAGGCGG
GGTGCTACAGAAATAAAACAACACCCTTTCTTTCAGAGCGTGAATTGGGCACTTATCCGA
TGTGCTAGTCCTCCTGATGTACCAAAGCCGTTCGTGCTACATGATGTCCCCAGCACACCA
GCAACAAAGGTGCCAGGCGCTGATAATTATTTTGAGATTGATTTCTTCTGA

Peptide Sequence

PEP ID

XP_016441784.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase D6PKL1-like [Nicotiana tabacum]
Sequence

MESLVEGVSSLPNSHTSFTPIKGNASSASRISRPPHPTSMRQSRCKELSFDPIAIDFGSK
TIDTPTGSGTASKCSYKTSSNRVKRDNISGSMRRYSELTKEKEDIEDTLDQQSQKCSLDR
VLIFEAKSAFKDSLHDNKNTTSSGFVERKDFMLHAVGRGDADLLTSQSGINYCPSPQNSF
YTATQYIEAKQSFTTTEVISECASSMAKSGESGDVSNSCDISESRKTSFYRGSTGSDISD
ESSCTSFSSAIYKPHQANDTKWDAIQAIRSLDGTLGFNHFRLLKRLGGGDIGNVFLAQLI
GTRDFFAMKVMDKAALESRKKIVRAQTEREILQSLDHPFLPTLYSHFETDKFSCLVMEFC
PGGDLHALRQRQPGKFFPEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIM
LSDFDLSLRCATSPTLVKSSNSSLESKTSSYCVQPACIEPSCIIQPACFSPRFLSRPKKG
KNTKQKTEMHNQVSPLPELLAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIF
LYELLFGQTPFKGAGNRATLFNVVGQPLRFPSSPSVSFAARDLIRGLLVKEPQHRLAYRR
GATEIKQHPFFQSVNWALIRCASPPDVPKPFVLHDVPSTPATKVPGADNYFEIDFF

Transcript Sequence

Gene sequence data has not been registered.